Publications
出版品
- 2017 Large-scale phenomics analysis of a T-DNA tagged mutant population.
- Wu HP, Wei FJ, Wu CC, Lo SF, Chen LJ, Fan MJ, Chen S, Wen IC, Yu SM, Ho TH, Lai MH, Hsing YI.
- GigaScience, Volume 6, Issue 8, 1 August 2017, Pages 1–7.
- 2016 Genetic resources offer efficient tools for rice functional genomics research.
- Lo SF, Fan MJ, Hsing YI, Chen LJ, Chen S, Wen IC, Liu YL, Chen KT, Jiang MJ, Lin MK, Rao MY, Yu LC, Ho TH, Yu SM.
- Plant Cell Environ. 2016 May;39(5):998-1013. doi: 10.1111/pce.12632. Epub 2015 Nov 24. (Review)
- 2013 International consortium of rice mutagenesis: resources and beyond.
- Wei FJ, Droc G, Guiderdoni E, Hsing YI.
- Rice (N Y). 2013 Dec 17;6(1):39. doi: 10.1186/1939-8433-6-39.
- 2010 Methods for rice phenomics studies.
- Chern CG, Fan MJ, Huang SC, Yu SM, Wei FJ, Wu CC, Trisiriroj A, Lai MH, Chen S, Hsing YI.
- Methods Mol Biol. 2011;678:129-38. doi: 10.1007/978-1-60761-682-5_10.
- 2007 Global functional analyses of rice promoters by genomics approaches.
- Yu SM, Ko SS, Hong CY, Sun HJ, Hsing YI, Tong CG, Ho TH.
- Plant Mol Biol. 2007 Nov;65(4):417-25. Epub 2007 Oct 9.
- 2007 A rice phenomics study - phenotype scoring and seed propagation of a T-DNA insertion-induced rice mutant population.
- Chern CG, Fan MJ, Yu SM, Hour AL, Lu PC, Lin YC, Wei FJ, Huang SC, Chen S, Lai MH, Tseng CS, Yen HM, Jwo WS, Wu CC, Yang TL, Li LS, Kuo YC, Li SM, Li CP, Wey CK, Trisiriroj A, Lee HF, Hsing YI.
- Plant Mol Biol. 2007 Nov;65(4):427-38. Epub 2007 Aug 14.
- 2007 A rice gene activation/knockout mutant resource for high throughput functional genomics.
- Hsing YI, Chern CG, Fan MJ, Lu PC, Chen KT, Lo SF, Sun PK, Ho SL, Lee KW, Wang YC, Huang WL, Ko SS, Chen S, Chen JL, Chung CI, Lin YC, Hour AL, Wang YW, Chang YC, Tsai MW, Lin YS, Chen YC, Yen HM, Li CP, Wey CK, Tseng CS, Lai MH, Huang SC, Chen LJ, Yu SM.
- Plant Mol Biol. 2007 Feb;63(3):351-64. Epub 2006 Nov 21. (highly accessed)
- 2007 Activation tagging systems in rice.
- Johnson AAT, Yu SM, Tester M.
- Rice Functional Genomics: Challenges, Progress and Prospects. Narayana Upadhyaya (ed.) Springer. 2007; pp 333-353 (invited review article)
- 2024 A newly evolved rice-specific gene JAUP1 regulates jasmonate biosynthesis and signalling to promote root development and multi-stress tolerance.
- Muzaffar A, Chen YS, Lee HT, Wu CC, Le TT, Liang JZ, Lu CH, Balasubramaniam H, Lo SF, Yu LC, Chan CH, Chen KT, Lee MH, Hsing YI, Ho TD, Yu SM.
- Plant Biotechnol J. 2024 May;22(5):1417-1432. doi: 10.1111/pbi.14276. Epub 2024 Jan 9.
- 2017 Ectopic expression of specific GA2 oxidase mutants promotes yield and stress tolerance in rice.
- Lo SF, Ho TH, Liu YL, Jiang MJ, Hsieh KT, Chen KT, Yu LC, Lee MH, Chen CY, Huang TP, Kojima M, Sakakibara H, Chen LJ, Yu SM.
- Plant Biotechnol J. 2017 Jul;15(7):850-864. doi: 10.1111/pbi.12681. Epub 2017 Mar 23.
- 2016 Somaclonal variation does not preclude the use of rice transformants for genetic screening.
- Wei FJ, Kuang LY, Oung HM, Cheng SY, Wu HP, Huang LT, Tseng YT, Chiou WY, Hsieh-Feng V, Chung CH, Yu SM, Lee LY, Gelvin SB, Hsing YI.
- Plant J. 2016 Mar;85(5):648-59. doi: 10.1111/tpj.13132.
- 2015 BIG GRAIN 2, a novel plant specific gene involved in promoting cell proliferation and grain size in rice.
- Liao CY, Lo SF, Ho TH, Yu SM.
- 2015 (in preparation)
- 2015 BIG GRAIN 1, a novel plant specific gene involved in promoting cell proliferation and grain size in rice.
- Cheng ML, Lo SF, Ho TH, Yu SM.
- 2015 (in preparation)
- 2015 Mitochondria senses O2 and sugar deficiency signals essential for underwater germination and seedling growth in rice.
- Lee KW, Chen YP, Yu SM.
- 2015 (in preparation)
- 2015 A protein phosphatase promoting suberin and lignin biosynthesis inhibits lateral root emergence but confers osmotic tolerance in rice.
- Lu CH, Chang CC, Ho TD, Yu SM.
- 2015 (in preparation)
- 2015 Abscisic acid/stress-treated rice roots are re-differentiated into a storage organ for starch and lipids.
- Hsieh TH, Hong CY, Huang JZ, Tseng IC, Su NW, Sun HJ, Yu SM, TH Ho.
- Plant Physiol. 2015 (to be submitted)
- 2015 Source-sink communication: regulated by hormone, nutrient, and stress cross-signaling.
- Yu SM, Lo SF, Ho TH.
- Trends Plant Sci. 2015 Dec;20(12):844-57. doi: 10.1016/j.tplants.2015.10.009. Epub 2015 Nov 18. (Review)
- 2015 Action of multiple intra-QTL genes concerted around a co-localized transcription factor underpins a large effect QTL.
- Dixit S, Kumar Biswal A, Min A, Henry A, Oane RH, Raorane ML, Longkumer T, Pabuayon IM, Mutte SK, Vardarajan AR, Miro B, Govindan G, Albano-Enriquez B, Pueffeld M, Sreenivasulu N, Slamet-Loedin I, Sundarvelpandian K, Tsai YC, Raghuvanshi S, Hsing YI, Kumar A, Kohli A.
- Sci Rep. 2015 Oct 28;5:15183. doi: 10.1038/srep15183.
- 2015 MicroRNA-mediated regulation of gene expression in the response of rice plants to fungal elicitors.
- Baldrich P, Campo S, Wu MT, Liu TT, Hsing YI, San Segundo B.
- RNA Biol. 2015;12(8):847-63. doi: 10.1080/15476286.2015.1050577.
- 2014 Metabolic adaptation to sugar/O2 deficiency for anaerobic germination and seedling growth in rice.
- Lee KW, Chen PW, Yu SM.
- A special issue on Flooding Stress in Plants. Plant Cell Environ. 2014 Oct;37(10):2234-44. doi: 10.1111/pce.12311. Epub 2014 Apr 9. (invited review article)
- 2014 Expression of a gene encoding a rice RING zinc-finger protein, OsRZFP34, enhances stomata opening.
- Hsu KH, Liu CC, Wu SJ, Kuo YY, Lu CA, Wu CR, Lian PJ, Hong CY, Ke YT, Huang JH, Yeh CH.
- Plant Mol Biol. 2014 Sep;86(1-2):125-37. doi: 10.1007/s11103-014-0217-6. Epub 2014 Jul 8.
- 2014 The bHLH142 transcription factor coordinates with TDR1 to modulate the expression of EAT1 and regulate pollen development in rice.
- Ko SS, Li MJ, Ku MSB, Ho YC, Lin YJ, Chuang MH, Hsing HX, Lien YC, Yang HT, Chang HC, Chan MT.
- Plant Cell. 2014 Jun;26(6):2486-2504. Epub 2014 Jun 3.
- 2014 Increasing leaf vein density by mutagenesis: laying the foundations for C4 rice.
- Feldman AB, Murchie EH, Leung H, Baraoidan M, Coe R, Yu SM, Lo SF, Quick WP.
- PLoS One. 2014 Apr 23;9(4):e94947. doi: 10.1371/journal.pone.0094947. eCollection 2014.
- 2014 SnRK1A-interacting negative regulators modulate the nutrient starvation signaling sensor SnRK1 in source-sink communication in cereal seedlings under abiotic stress.
- Lin CR, Lee KW, Chen CY, Hong YF, Chen JL, Lu CA, Chen KT, Ho TH, Yu SM.
- Plant Cell. 2014 Feb;26(2):808-27. doi: 10.1105/tpc.113.121939. Epub 2014 Feb 25.
- 2013 Screening of a T-DNA-tagged gene activation/knockout rice mutant library for identification of genes controlling the C4 photosynthesis pathway.
- Lo SF, Hsing YI, Ho TH, Ku MSB, Quick WP, Mabilangan A, Leung H, Bruskiewich R, Fan MJ, Chen LJ, Yu SM.
- 2013 (to be submitted)
- 2013 Abscisic acid- and stress-induced highly proline-rich glycoproteins regulate root growth in rice.
- Tseng IC, Hong CY, Yu SM, Ho TH.
- Plant Physiol. 2013 Sep;163(1):118-34. doi: 10.1104/pp.113.217547. Epub 2013 Jul 25.
- 2013 Ectopic expression of OsMADS45 activates the upstream genes Hd3a and RFT1 at an early development stage causing early flowering in rice.
- Wang JD, Lo SF, Li YS, Chen PJ, Lin SY, Ho TY, Lin JH, Chen LJ.
- Bot Studies. (2013) 54: 12. doi:10.1186/1999-3110-54-12.
- 2012 Rice LGD1 containing RNA binding activity affects growth and development through alternative promoters.
- Thangasamy S, Chen PW, Lai MH, Chen JC, Jauh GY.
- Plant J. 2012 Jul;71(2):288-302. doi: 10.1111/j.1365-313X.2012.04989.x. Epub 2012 May 25.
- 2012 Serotonin accumulation in transgenic rice by over-expressing tryptophan decarboxylase results in a dark brown phenotype and stunted growth.
- Kanjanaphachoat P, Wei BY, Lo SF, Wang IW, Wang CS, Yu SM, Yen ML, Chiu SH, Lai CC, Chen LJ.
- Plant Mol Biol. 2012 Apr;78(6):525-43. doi: 10.1007/s11103-012-9882-5.
- 2011 Rice SIZ1, a SUMO E3 ligase, controls spikelet fertility through regulation of anther dehiscence.
- Thangasamy S, Guo CL, Chuang MH, Lai MH, Chen JC, Jauh GY.
- New Phytol. 2011 Feb;189(3):869-82. doi: 10.1111/j.1469-8137.2010.03538.x. Epub 2010 Nov 16.
- 2010 A rice DEAD-box protein, OsRH36, can complement an Arabidopsis atrh36 mutant, but cannot functionally replace its yeast homolog Dbp8p.
- Huang CK, Yu SM, Lu CA.
- Plant Mol Biol. 2010 Sep;74(1-2):119-28. doi: 10.1007/s11103-010-9659-7. Epub 2010 Jul 6.
- 2010 A DEAD-box protein, AtRH36, is essential for female gametophyte development and is involved in rRNA biogenesis in Arabidopsis.
- Huang CK, Huang LF, Huang JJ, Wu SJ, Yeh CH, Lu CA.
- Plant Cell Physiol. 2010 May;51(5):694-706. doi: 10.1093/pcp/pcq045. Epub 2010 Apr 8.
- 2009 Mutant resources in rice for functional genomics of the grasses.
- Krishnan A, Guiderdoni E, An G, Hsing YI, Han CD, Lee MC, Yu SM, Upadhyaya N, Ramachandran S, Zhang Q, Sundaresan V, Hirochika H, Leung H, Pereira A.
- Plant Physiol. 2009 Jan;149(1):165-70. doi: 10.1104/pp.108.128918.
- 2008 A novel class of gibberellin 2-oxidases control semidwarfism, tillering, and root development in rice.
- Lo SF, Yang SY, Chen KT, Hsing YI, Zeevaart JA, Chen LJ, Yu SM.
- Plant Cell. 2008 Oct;20(10):2603-18. doi: 10.1105/tpc.108.060913. Epub 2008 Oct 24.
- 2007 The SnRK1A protein kinase plays a key role in sugar signaling during germination and seedling growth of rice.
- Lu CA, Lin CC, Lee KW, Chen JL, Huang LF, Ho SL, Liu HJ, Hsing YI, Yu SM.
- Plant Cell. 2007 Aug;19(8):2484-99. Epub 2007 Aug 31.
- 2007 T-DNA insertion mutants as a resource for rice functional genomics.
- Guiderdoni E, An G, Yu SM, Hsing YI, Wu CY.
- Rice Functional Genomics: Challenges, Progress and Prospects. Narayana Upadhyaya (ed.) Springer. 2007; pp 181-221
- 2006 Designing and constructing novel gene promoters to generate stress-tolerant plants without yield penalty.
- Ho TH, Hong CY, Chan MT, Yu SM.
- Rice Genetics V: Proceedings of the Fifth International Rice Genetics Symposium, Darshan S Brar, David J Mackill & Bill Hardy (ed.). 2006; pp 331-340
- 2004 Rice mutant resources for gene discovery.
- Hirochika H, Guiderdoni E, An G, Hsing YI, Eun MY, Han CD, Upadhyaya N, Ramachandran S, Zhang Q, Pereira A, Sundaresan V, Leung H.
- Plant Mol Biol. 2004 Feb;54(3):325-34.